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crisdiwenn/README.md

Hi, I'm Cristian Silva πŸ‘‹

PhD Researcher at Chalmers University of Technology, Gothenburg, Sweden.
I study microbial communities in wastewater treatment systems using metagenomics and bioinformatics.


Research

  • 🦠 Methanotrophic bacteria, anammox, and microbial ecology in engineered systems
  • 🧬 Metagenome-assembled genomes (MAGs), functional annotation, and taxonomic profiling
  • πŸ’» HPC workflows on SLURM clusters using Nextflow, bash, and Python
  • πŸ”¬ Investigating the methane paradox in partial nitrification-anammox reactors

Beyond the Lab

  • 🌍 Co-founder of DreamSpace Biolab β€” Sri Lanka's first citizen-science lab
  • πŸ† Swedish Institute Scholarship recipient

Skills

Bash Python R Nextflow Linux Git


Let's Collaborate

I am open to collaborations in:

  • Microbial ecology and wastewater metagenomics
  • Bioinformatics pipeline development
  • Science communication and open science

πŸ“§ hettige@chalmers.se
πŸ”— LinkedIn
🌐 crisdiwenn.com


Pinned Loading

  1. Fluffynator Fluffynator Public

    Hacking aromatherapy humidifier to make mushrooms objects fluffy

    C++

  2. nextflow-workshop nextflow-workshop Public

    Hands-on Nextflow + biocontainers workshop for bioinformatics pipelines

    Shell

  3. Prospective-Life-Cycle-Inventory-Calculations-and-Data-Visualization Prospective-Life-Cycle-Inventory-Calculations-and-Data-Visualization Public

    Jupyter Notebook

  4. dreamspace-hemagluttin-gene-mutation-analysis-of-monkeypox dreamspace-hemagluttin-gene-mutation-analysis-of-monkeypox Public

    Forked from aracreate-group/acrh-mpxv-hemagglutinin-analysis

    Jupyter Notebook