diff --git a/dev-python/pyfaidx/Manifest b/dev-python/pyfaidx/Manifest
index 168778b62f3..c2e7b248813 100644
--- a/dev-python/pyfaidx/Manifest
+++ b/dev-python/pyfaidx/Manifest
@@ -1 +1 @@
-DIST pyfaidx-0.9.0.4.tar.gz 71759 BLAKE2B c81c39180d1e6624e2d75ab7c343b4824a673d6a8c61274ad4a0835a75f2ee49421e624304ea740e39b3bcc0256bce46ef60892151d5cdd317fd588f46f49e3a SHA512 98249b0f8c5caef87af6a41debff681c1c55be60edfbe78ad328105dfb00cdef762a83df9552355282968efda13cca3e98090bc41d2da8a80b4263e9e65affc1
+DIST pyfaidx-0.9.1.1.gh.tar.gz 64537 BLAKE2B b590fd2a0bedb5e19e08728a27293edd8c224ea2e02176a0384e2921b5db2d46d2b61226607f972a7f77cf5366f3ec19792f1e3df2b06cac5e66acb5c6aa48c0 SHA512 f9251f5ceb9d533f7fa46826d872b909efe3b1b2d692012cfbb872d5378fc307807a4583efab070077c90ab33002ea01b6534fb0e7847fc7c5580d5a1b4e6976
diff --git a/dev-python/pyfaidx/pyfaidx-0.9.0.4.ebuild b/dev-python/pyfaidx/pyfaidx-0.9.0.4.ebuild
deleted file mode 100644
index 63909a4983c..00000000000
--- a/dev-python/pyfaidx/pyfaidx-0.9.0.4.ebuild
+++ /dev/null
@@ -1,28 +0,0 @@
-# Copyright 1999-2026 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-DISTUTILS_USE_PEP517=setuptools
-PYTHON_COMPAT=( python3_{12..13} )
-
-inherit distutils-r1 pypi
-
-DESCRIPTION="Efficient pythonic random access to fasta subsequences"
-HOMEPAGE="https://github.com/mdshw5/pyfaidx"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=">=sci-biology/pysam-0.23.1[${PYTHON_USEDEP}]"
-REPEND="dev-python/importlib_metadata[${PYTHON_USEDEP}]"
-
-EPYTEST_DESELECT=(
-	# needs external file
-	tests/test_Fasta_bgzip.py
-)
-
-EPYTEST_PLUGINS=()
-
-distutils_enable_tests pytest
diff --git a/dev-python/pyfaidx/pyfaidx-0.9.1.1.ebuild b/dev-python/pyfaidx/pyfaidx-0.9.1.1.ebuild
new file mode 100644
index 00000000000..82b8175a27c
--- /dev/null
+++ b/dev-python/pyfaidx/pyfaidx-0.9.1.1.ebuild
@@ -0,0 +1,40 @@
+# Copyright 1999-2026 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{12..15} )
+export SETUPTOOLS_SCM_PRETEND_VERSION=${PV}
+
+inherit distutils-r1
+
+DESCRIPTION="Efficient pythonic random access to fasta subsequences"
+HOMEPAGE="
+	https://github.com/mdshw5/pyfaidx
+	https://pypi.org/project/pyfaidx/
+"
+SRC_URI="https://github.com/mdshw5/pyfaidx/archive/v${PV}.tar.gz -> ${P}.gh.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="dev-python/packaging[${PYTHON_USEDEP}]"
+BDEPEND="dev-python/setuptools-scm[${PYTHON_USEDEP}]"
+
+EPYTEST_PLUGINS=()
+distutils_enable_tests pytest
+
+python_test() {
+	# The remaining tests require genome data downloaded separately by upstream
+	epytest -o addopts= \
+		tests/test_bed_non_data.py \
+		tests/test_bgzfblock.py \
+		'tests/test_faidx.py::test_faidx_cli_transform_chromsizes[False]' \
+		tests/test_feature_comments.py \
+		tests/test_feature_spliced_seq.py \
+		tests/test_long_fasta_entry.py \
+		tests/test_sequence_class.py \
+		tests/test_wrap_sequence_newline.py
+}